Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HTTP42858 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HTTP42858 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.87■□□□□ 0.77
HTTP42858 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HTTP42858 TIMM8BP1-201ENST00000452384 211 ntBASIC19.87■□□□□ 0.77
HTTP42858 AC067863.1-201ENST00000494933 530 ntBASIC19.87■□□□□ 0.77
HTTP42858 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.87■□□□□ 0.77
HTTP42858 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.87■□□□□ 0.77
HTTP42858 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
HTTP42858 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.86■□□□□ 0.77
HTTP42858 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HTTP42858 AC008677.1-201ENST00000519230 1561 ntBASIC19.86■□□□□ 0.77
HTTP42858 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HTTP42858 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
HTTP42858 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
HTTP42858 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HTTP42858 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HTTP42858 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HTTP42858 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.86■□□□□ 0.77
HTTP42858 AP001059.3-201ENST00000619053 235 ntBASIC19.86■□□□□ 0.77
HTTP42858 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HTTP42858 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HTTP42858 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.86■□□□□ 0.77
HTTP42858 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HTTP42858 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.86■□□□□ 0.77
HTTP42858 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.86■□□□□ 0.77
HTTP42858 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.86■□□□□ 0.77
HTTP42858 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.86■□□□□ 0.77
HTTP42858 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HTTP42858 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HTTP42858 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 BASP1P1-201ENST00000430708 665 ntBASIC19.85■□□□□ 0.77
HTTP42858 AL353135.1-201ENST00000606729 504 ntBASIC19.85■□□□□ 0.77
HTTP42858 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HTTP42858 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 AL355306.1-201ENST00000415580 579 ntBASIC19.85■□□□□ 0.77
HTTP42858 AC125807.1-201ENST00000483097 614 ntBASIC19.85■□□□□ 0.77
HTTP42858 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.85■□□□□ 0.77
HTTP42858 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.85■□□□□ 0.77
HTTP42858 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HTTP42858 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.84■□□□□ 0.77
HTTP42858 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.84■□□□□ 0.77
HTTP42858 KRT8P48-201ENST00000515599 1220 ntBASIC19.84■□□□□ 0.77
HTTP42858 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HTTP42858 AC006116.8-202ENST00000587620 1550 ntBASIC19.84■□□□□ 0.77
HTTP42858 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 TUBB3P1-201ENST00000405796 1332 ntBASIC19.84■□□□□ 0.77
HTTP42858 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
HTTP42858 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 GNAS-203ENST00000306120 1878 ntBASIC19.84■□□□□ 0.77
HTTP42858 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.84■□□□□ 0.77
HTTP42858 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HTTP42858 COX5BP8-201ENST00000416911 349 ntBASIC19.84■□□□□ 0.77
HTTP42858 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.84■□□□□ 0.77
HTTP42858 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.84■□□□□ 0.77
HTTP42858 LINC02560-201ENST00000596379 459 ntBASIC19.84■□□□□ 0.77
HTTP42858 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.84■□□□□ 0.77
HTTP42858 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.84■□□□□ 0.77
HTTP42858 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HTTP42858 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HTTP42858 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HTTP42858 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.83■□□□□ 0.77
HTTP42858 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.83■□□□□ 0.77
HTTP42858 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HTTP42858 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.83■□□□□ 0.76
HTTP42858 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTTP42858 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.83■□□□□ 0.76
HTTP42858 U91328.1-201ENST00000437528 223 ntBASIC19.83■□□□□ 0.76
HTTP42858 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.83■□□□□ 0.76
HTTP42858 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.83■□□□□ 0.76
HTTP42858 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.83■□□□□ 0.76
HTTP42858 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.83■□□□□ 0.76
HTTP42858 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms