Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CROCCP2-202ENST00000412962 2773 ntBASIC19.52■□□□□ 0.72
KRT9P35527 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT9P35527 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
KRT9P35527 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.52■□□□□ 0.71
KRT9P35527 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT9P35527 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
KRT9P35527 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
KRT9P35527 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT9P35527 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT9P35527 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
KRT9P35527 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
KRT9P35527 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT9P35527 AC211429.1-201ENST00000415277 523 ntBASIC19.51■□□□□ 0.71
KRT9P35527 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT9P35527 AC140113.3-201ENST00000605663 199 ntBASIC19.51■□□□□ 0.71
KRT9P35527 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT9P35527 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT9P35527 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
KRT9P35527 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 AC084018.2-201ENST00000613093 2607 ntBASIC19.51■□□□□ 0.71
KRT9P35527 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
KRT9P35527 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT9P35527 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
KRT9P35527 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT9P35527 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT9P35527 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
KRT9P35527 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT9P35527 AL137013.1-201ENST00000432946 1228 ntBASIC19.5■□□□□ 0.71
KRT9P35527 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT9P35527 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.5■□□□□ 0.71
KRT9P35527 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.5■□□□□ 0.71
KRT9P35527 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT9P35527 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
KRT9P35527 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
KRT9P35527 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
KRT9P35527 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT9P35527 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
KRT9P35527 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT9P35527 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT9P35527 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
KRT9P35527 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
KRT9P35527 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT9P35527 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT9P35527 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT9P35527 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
KRT9P35527 AC113347.1-201ENST00000413321 391 ntBASIC19.49■□□□□ 0.71
KRT9P35527 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
KRT9P35527 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms