Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HOXC8P31273 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HOXC8P31273 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 AP002414.1-201ENST00000391405 1147 ntBASIC19.32■□□□□ 0.68
HOXC8P31273 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
HOXC8P31273 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXC8P31273 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC8P31273 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC8P31273 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXC8P31273 OR7E47P-204ENST00000575924 449 ntBASIC19.32■□□□□ 0.68
HOXC8P31273 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HOXC8P31273 AC010654.1-201ENST00000615722 808 ntBASIC19.32■□□□□ 0.68
HOXC8P31273 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC8P31273 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC8P31273 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC8P31273 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXC8P31273 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC8P31273 KRT18P55-202ENST00000578578 1546 ntBASIC19.31■□□□□ 0.68
HOXC8P31273 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 AP000997.3-201ENST00000623333 2250 ntBASIC19.31■□□□□ 0.68
HOXC8P31273 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC8P31273 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC8P31273 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HOXC8P31273 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 PMS2P2-201ENST00000425039 1128 ntBASIC19.31■□□□□ 0.68
HOXC8P31273 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC8P31273 DNAJB3-202ENST00000449667 1266 ntBASIC19.31■□□□□ 0.68
HOXC8P31273 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC8P31273 MIR4751-201ENST00000578027 74 ntBASIC19.31■□□□□ 0.68
HOXC8P31273 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC8P31273 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC8P31273 AC079781.4-201ENST00000641908 219 ntBASIC19.31■□□□□ 0.68
HOXC8P31273 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC8P31273 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC8P31273 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC8P31273 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HOXC8P31273 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC8P31273 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC8P31273 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HOXC8P31273 AL020996.1-203ENST00000536896 2307 ntBASIC19.3■□□□□ 0.68
HOXC8P31273 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC8P31273 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC8P31273 REXO1L9P-201ENST00000604264 2108 ntBASIC19.3■□□□□ 0.68
HOXC8P31273 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HOXC8P31273 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 MYCLP1-201ENST00000372451 1075 ntBASIC19.3■□□□□ 0.68
HOXC8P31273 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC8P31273 PTCHD3P3-201ENST00000403073 906 ntBASIC19.3■□□□□ 0.68
HOXC8P31273 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC8P31273 LINC00982-205ENST00000420957 435 ntBASIC19.3■□□□□ 0.68
HOXC8P31273 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.3■□□□□ 0.68
HOXC8P31273 ALG1L5P-201ENST00000482043 771 ntBASIC19.3■□□□□ 0.68
HOXC8P31273 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.3■□□□□ 0.68
HOXC8P31273 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC8P31273 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC8P31273 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC8P31273 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 AC097637.2-201ENST00000624096 1997 ntBASIC19.3■□□□□ 0.68
HOXC8P31273 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC8P31273 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXC8P31273 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HOXC8P31273 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HOXC8P31273 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXC8P31273 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC8P31273 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC8P31273 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC8P31273 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC8P31273 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.29■□□□□ 0.68
HOXC8P31273 AC018845.2-201ENST00000568326 409 ntBASIC19.29■□□□□ 0.68
HOXC8P31273 AC005829.1-201ENST00000570002 483 ntBASIC19.29■□□□□ 0.68
HOXC8P31273 AL513190.1-201ENST00000621254 727 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms