Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.15■□□□□ 0.18
GDF1P27539 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.15■□□□□ 0.18
GDF1P27539 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
GDF1P27539 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
GDF1P27539 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
GDF1P27539 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.15■□□□□ 0.18
GDF1P27539 FAM220CP-201ENST00000395253 831 ntBASIC16.15■□□□□ 0.18
GDF1P27539 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.15■□□□□ 0.18
GDF1P27539 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.15■□□□□ 0.18
GDF1P27539 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.15■□□□□ 0.18
GDF1P27539 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.15■□□□□ 0.18
GDF1P27539 AC116407.2-201ENST00000613639 860 ntBASIC16.15■□□□□ 0.18
GDF1P27539 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
GDF1P27539 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
GDF1P27539 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.15■□□□□ 0.18
GDF1P27539 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.15■□□□□ 0.18
GDF1P27539 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GDF1P27539 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
GDF1P27539 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
GDF1P27539 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GDF1P27539 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
GDF1P27539 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
GDF1P27539 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
GDF1P27539 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
GDF1P27539 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GDF1P27539 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.14■□□□□ 0.17
GDF1P27539 KRT8P10-201ENST00000450021 1447 ntBASIC16.14■□□□□ 0.17
GDF1P27539 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.14■□□□□ 0.17
GDF1P27539 AF238378.1-201ENST00000526806 358 ntBASIC16.14■□□□□ 0.17
GDF1P27539 AC008608.2-201ENST00000606089 416 ntBASIC16.14■□□□□ 0.17
GDF1P27539 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.14■□□□□ 0.17
GDF1P27539 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.14■□□□□ 0.17
GDF1P27539 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
GDF1P27539 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
GDF1P27539 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.14■□□□□ 0.17
GDF1P27539 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 AC097374.2-201ENST00000618617 1306 ntBASIC16.14■□□□□ 0.17
GDF1P27539 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.14■□□□□ 0.17
GDF1P27539 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GDF1P27539 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
GDF1P27539 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
GDF1P27539 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.13■□□□□ 0.17
GDF1P27539 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 AC096633.1-201ENST00000422446 749 ntBASIC16.13■□□□□ 0.17
GDF1P27539 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.13■□□□□ 0.17
GDF1P27539 AL160237.2-201ENST00000556165 472 ntBASIC16.13■□□□□ 0.17
GDF1P27539 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms