Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
COL11A2P13942 DDX43P3-201ENST00000441064 443 ntBASIC21.6■■□□□ 1.05
COL11A2P13942 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.6■■□□□ 1.05
COL11A2P13942 ACTL9-202ENST00000612068 1252 ntBASIC21.6■■□□□ 1.05
COL11A2P13942 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A2P13942 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A2P13942 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
COL11A2P13942 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A2P13942 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A2P13942 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
COL11A2P13942 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.59■■□□□ 1.05
COL11A2P13942 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.59■■□□□ 1.05
COL11A2P13942 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A2P13942 AC138761.1-201ENST00000584393 385 ntBASIC21.59■■□□□ 1.05
COL11A2P13942 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A2P13942 LINC00628-201ENST00000628516 1289 ntBASIC21.59■■□□□ 1.05
COL11A2P13942 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A2P13942 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A2P13942 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 AL096828.2-201ENST00000567259 1965 ntBASIC21.59■■□□□ 1.05
COL11A2P13942 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
COL11A2P13942 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A2P13942 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A2P13942 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COL11A2P13942 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.58■■□□□ 1.05
COL11A2P13942 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.58■■□□□ 1.05
COL11A2P13942 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.58■■□□□ 1.05
COL11A2P13942 MIR661-201ENST00000384842 89 ntBASIC21.58■■□□□ 1.05
COL11A2P13942 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.58■■□□□ 1.05
COL11A2P13942 FAM86GP-201ENST00000448322 971 ntBASIC21.58■■□□□ 1.05
COL11A2P13942 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 AC004449.1-201ENST00000564240 433 ntBASIC21.58■■□□□ 1.05
COL11A2P13942 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.58■■□□□ 1.05
COL11A2P13942 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A2P13942 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A2P13942 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A2P13942 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A2P13942 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A2P13942 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A2P13942 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
COL11A2P13942 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.58■■□□□ 1.04
COL11A2P13942 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A2P13942 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.57■■□□□ 1.04
COL11A2P13942 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL11A2P13942 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
COL11A2P13942 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.57■■□□□ 1.04
COL11A2P13942 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
COL11A2P13942 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.57■■□□□ 1.04
COL11A2P13942 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL11A2P13942 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL11A2P13942 AL355306.1-201ENST00000415580 579 ntBASIC21.57■■□□□ 1.04
COL11A2P13942 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.57■■□□□ 1.04
COL11A2P13942 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.57■■□□□ 1.04
COL11A2P13942 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.57■■□□□ 1.04
COL11A2P13942 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.57■■□□□ 1.04
COL11A2P13942 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.57■■□□□ 1.04
COL11A2P13942 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
COL11A2P13942 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A2P13942 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 AC073592.3-201ENST00000625118 1834 ntBASIC21.56■■□□□ 1.04
COL11A2P13942 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.56■■□□□ 1.04
COL11A2P13942 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A2P13942 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COL11A2P13942 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms