Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC30.26■■■□□ 2.44
CFTRP13569 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CFTRP13569 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
CFTRP13569 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC30.26■■■□□ 2.43
CFTRP13569 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CFTRP13569 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CFTRP13569 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CFTRP13569 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CFTRP13569 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC30.25■■■□□ 2.43
CFTRP13569 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC30.25■■■□□ 2.43
CFTRP13569 AC236430.1-201ENST00000402231 743 ntBASIC30.25■■■□□ 2.43
CFTRP13569 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC30.25■■■□□ 2.43
CFTRP13569 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CFTRP13569 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CFTRP13569 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC30.25■■■□□ 2.43
CFTRP13569 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CFTRP13569 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC30.25■■■□□ 2.43
CFTRP13569 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC30.25■■■□□ 2.43
CFTRP13569 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CFTRP13569 CYP51A1P2-201ENST00000419457 1499 ntBASIC30.25■■■□□ 2.43
CFTRP13569 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC30.25■■■□□ 2.43
CFTRP13569 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC30.25■■■□□ 2.43
CFTRP13569 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC30.25■■■□□ 2.43
CFTRP13569 HFE2-206ENST00000634927 506 ntTSL 4 BASIC30.25■■■□□ 2.43
CFTRP13569 AC100803.2-201ENST00000562459 1963 ntBASIC30.25■■■□□ 2.43
CFTRP13569 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
CFTRP13569 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
CFTRP13569 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CFTRP13569 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 CNN2P2-201ENST00000443536 909 ntBASIC30.24■■■□□ 2.43
CFTRP13569 CNN2P3-201ENST00000450201 906 ntBASIC30.24■■■□□ 2.43
CFTRP13569 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 RN7SL204P-201ENST00000582831 262 ntBASIC30.24■■■□□ 2.43
CFTRP13569 AC026120.1-201ENST00000611536 926 ntBASIC30.24■■■□□ 2.43
CFTRP13569 AL136317.3-201ENST00000618497 906 ntBASIC30.24■■■□□ 2.43
CFTRP13569 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CFTRP13569 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC30.24■■■□□ 2.43
CFTRP13569 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC30.24■■■□□ 2.43
CFTRP13569 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC30.23■■■□□ 2.43
CFTRP13569 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 GSAP-205ENST00000430584 600 ntTSL 5 BASIC30.23■■■□□ 2.43
CFTRP13569 TIMM8BP1-201ENST00000452384 211 ntBASIC30.23■■■□□ 2.43
CFTRP13569 UGT1A2P-201ENST00000454886 866 ntBASIC30.23■■■□□ 2.43
CFTRP13569 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
CFTRP13569 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC30.23■■■□□ 2.43
CFTRP13569 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC30.23■■■□□ 2.43
CFTRP13569 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC30.23■■■□□ 2.43
CFTRP13569 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC30.23■■■□□ 2.43
CFTRP13569 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC30.23■■■□□ 2.43
CFTRP13569 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC30.23■■■□□ 2.43
CFTRP13569 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
CFTRP13569 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CFTRP13569 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC30.22■■■□□ 2.43
CFTRP13569 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CFTRP13569 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CFTRP13569 INO80E-210ENST00000567705 880 ntTSL 3 BASIC30.22■■■□□ 2.43
CFTRP13569 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC30.22■■■□□ 2.43
CFTRP13569 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC30.22■■■□□ 2.43
CFTRP13569 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC30.22■■■□□ 2.43
CFTRP13569 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CFTRP13569 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC30.22■■■□□ 2.43
CFTRP13569 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CFTRP13569 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC30.22■■■□□ 2.43
CFTRP13569 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
CFTRP13569 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CFTRP13569 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CFTRP13569 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
CFTRP13569 EFS-203ENST00000429593 2610 ntTSL 2 BASIC30.21■■■□□ 2.43
CFTRP13569 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CFTRP13569 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CFTRP13569 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC30.21■■■□□ 2.43
CFTRP13569 AC002558.1-201ENST00000488906 803 ntBASIC30.21■■■□□ 2.43
CFTRP13569 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC30.21■■■□□ 2.43
CFTRP13569 AP001059.3-201ENST00000619053 235 ntBASIC30.21■■■□□ 2.43
CFTRP13569 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CFTRP13569 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC30.21■■■□□ 2.43
CFTRP13569 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
CFTRP13569 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CFTRP13569 AC055876.3-201ENST00000431496 288 ntBASIC30.2■■■□□ 2.43
CFTRP13569 GATB-205ENST00000508611 605 ntTSL 2 BASIC30.2■■■□□ 2.43
CFTRP13569 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC30.2■■■□□ 2.43
CFTRP13569 AC138649.4-201ENST00000612222 287 ntBASIC30.2■■■□□ 2.43
CFTRP13569 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC30.2■■■□□ 2.43
CFTRP13569 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC30.2■■■□□ 2.43
CFTRP13569 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC30.2■■■□□ 2.43
CFTRP13569 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC30.2■■■□□ 2.43
CFTRP13569 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms