Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 MINOS1P3-201ENST00000457048 203 ntBASIC20.5■□□□□ 0.87
SCG2P13521 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.5■□□□□ 0.87
SCG2P13521 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.5■□□□□ 0.87
SCG2P13521 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.5■□□□□ 0.87
SCG2P13521 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.5■□□□□ 0.87
SCG2P13521 AC009533.2-201ENST00000543664 586 ntBASIC20.5■□□□□ 0.87
SCG2P13521 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.5■□□□□ 0.87
SCG2P13521 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.5■□□□□ 0.87
SCG2P13521 BNIP3P18-201ENST00000593976 575 ntBASIC20.5■□□□□ 0.87
SCG2P13521 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.5■□□□□ 0.87
SCG2P13521 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SCG2P13521 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SCG2P13521 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.5■□□□□ 0.87
SCG2P13521 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SCG2P13521 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.5■□□□□ 0.87
SCG2P13521 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.5■□□□□ 0.87
SCG2P13521 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG2P13521 GNAS-203ENST00000306120 1878 ntBASIC20.5■□□□□ 0.87
SCG2P13521 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.5■□□□□ 0.87
SCG2P13521 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.49■□□□□ 0.87
SCG2P13521 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SCG2P13521 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.49■□□□□ 0.87
SCG2P13521 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SCG2P13521 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SCG2P13521 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SCG2P13521 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.49■□□□□ 0.87
SCG2P13521 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.49■□□□□ 0.87
SCG2P13521 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.49■□□□□ 0.87
SCG2P13521 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.49■□□□□ 0.87
SCG2P13521 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.49■□□□□ 0.87
SCG2P13521 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SCG2P13521 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SCG2P13521 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG2P13521 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 BX276092.7-203ENST00000637198 1536 ntBASIC20.48■□□□□ 0.87
SCG2P13521 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.48■□□□□ 0.87
SCG2P13521 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.48■□□□□ 0.87
SCG2P13521 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
SCG2P13521 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.48■□□□□ 0.87
SCG2P13521 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.48■□□□□ 0.87
SCG2P13521 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.48■□□□□ 0.87
SCG2P13521 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 AC012313.10-201ENST00000623509 926 ntBASIC20.48■□□□□ 0.87
SCG2P13521 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.48■□□□□ 0.87
SCG2P13521 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SCG2P13521 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.48■□□□□ 0.87
SCG2P13521 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SCG2P13521 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG2P13521 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SCG2P13521 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.47■□□□□ 0.87
SCG2P13521 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG2P13521 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SCG2P13521 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG2P13521 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SCG2P13521 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG2P13521 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
SCG2P13521 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG2P13521 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SCG2P13521 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG2P13521 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG2P13521 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG2P13521 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms