Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCL4P13236 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.75■□□□□ 0.27
CCL4P13236 AC004967.1-201ENST00000453589 447 ntBASIC16.75■□□□□ 0.27
CCL4P13236 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
CCL4P13236 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL4P13236 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL4P13236 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL4P13236 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL4P13236 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 AC100803.2-201ENST00000562459 1963 ntBASIC16.75■□□□□ 0.27
CCL4P13236 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL4P13236 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL4P13236 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCL4P13236 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL4P13236 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL4P13236 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL4P13236 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL4P13236 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL4P13236 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL4P13236 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 AP000974.1-201ENST00000623909 2387 ntBASIC16.74■□□□□ 0.27
CCL4P13236 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.74■□□□□ 0.27
CCL4P13236 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL4P13236 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL4P13236 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCL4P13236 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCL4P13236 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL4P13236 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCL4P13236 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CCL4P13236 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL4P13236 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.73■□□□□ 0.27
CCL4P13236 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.73■□□□□ 0.27
CCL4P13236 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.73■□□□□ 0.27
CCL4P13236 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.73■□□□□ 0.27
CCL4P13236 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CCL4P13236 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.73■□□□□ 0.27
CCL4P13236 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL4P13236 MTDHP5-201ENST00000598980 586 ntBASIC16.73■□□□□ 0.27
CCL4P13236 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCL4P13236 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL4P13236 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.73■□□□□ 0.27
CCL4P13236 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 WIZP1-201ENST00000531444 2299 ntBASIC16.73■□□□□ 0.27
CCL4P13236 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 AC093677.2-201ENST00000600169 1863 ntBASIC16.73■□□□□ 0.27
CCL4P13236 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms