Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC30.9■■■□□ 2.54
TOP2AP11388 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC30.9■■■□□ 2.54
TOP2AP11388 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC30.9■■■□□ 2.54
TOP2AP11388 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
TOP2AP11388 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC30.9■■■□□ 2.54
TOP2AP11388 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC30.9■■■□□ 2.54
TOP2AP11388 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
TOP2AP11388 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
TOP2AP11388 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC30.89■■■□□ 2.54
TOP2AP11388 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TOP2AP11388 ACTL9-202ENST00000612068 1252 ntBASIC30.89■■■□□ 2.54
TOP2AP11388 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC30.89■■■□□ 2.54
TOP2AP11388 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TOP2AP11388 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TOP2AP11388 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC30.89■■■□□ 2.54
TOP2AP11388 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC30.89■■■□□ 2.54
TOP2AP11388 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
TOP2AP11388 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
TOP2AP11388 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC30.89■■■□□ 2.53
TOP2AP11388 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.53
TOP2AP11388 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
TOP2AP11388 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC30.88■■■□□ 2.53
TOP2AP11388 AL035633.1-201ENST00000406139 838 ntBASIC30.88■■■□□ 2.53
TOP2AP11388 AC004461.1-201ENST00000412461 403 ntBASIC30.88■■■□□ 2.53
TOP2AP11388 FAM8A3P-201ENST00000427218 844 ntBASIC30.88■■■□□ 2.53
TOP2AP11388 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
TOP2AP11388 LSM12-202ENST00000585388 942 ntTSL 3 BASIC30.88■■■□□ 2.53
TOP2AP11388 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TOP2AP11388 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
TOP2AP11388 AC092919.2-201ENST00000623631 1645 ntBASIC30.88■■■□□ 2.53
TOP2AP11388 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TOP2AP11388 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC30.88■■■□□ 2.53
TOP2AP11388 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TOP2AP11388 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC30.88■■■□□ 2.53
TOP2AP11388 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC30.88■■■□□ 2.53
TOP2AP11388 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC30.88■■■□□ 2.53
TOP2AP11388 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC30.88■■■□□ 2.53
TOP2AP11388 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC30.88■■■□□ 2.53
TOP2AP11388 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TOP2AP11388 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC30.88■■■□□ 2.53
TOP2AP11388 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TOP2AP11388 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC30.88■■■□□ 2.53
TOP2AP11388 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC30.88■■■□□ 2.53
TOP2AP11388 CXCL1P1-201ENST00000502804 216 ntBASIC30.88■■■□□ 2.53
TOP2AP11388 IGHV3-52-201ENST00000519770 353 ntBASIC30.88■■■□□ 2.53
TOP2AP11388 AC023141.13-201ENST00000604991 943 ntBASIC30.88■■■□□ 2.53
TOP2AP11388 MED16-214ENST00000617672 554 ntTSL 5 BASIC30.88■■■□□ 2.53
TOP2AP11388 CYP51A1P2-201ENST00000419457 1499 ntBASIC30.87■■■□□ 2.53
TOP2AP11388 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TOP2AP11388 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC30.87■■■□□ 2.53
TOP2AP11388 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
TOP2AP11388 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TOP2AP11388 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
TOP2AP11388 AC023141.5-201ENST00000458585 616 ntBASIC30.87■■■□□ 2.53
TOP2AP11388 AC074386.1-202ENST00000463561 864 ntBASIC30.87■■■□□ 2.53
TOP2AP11388 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
TOP2AP11388 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC30.87■■■□□ 2.53
TOP2AP11388 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC30.87■■■□□ 2.53
TOP2AP11388 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC30.86■■■□□ 2.53
TOP2AP11388 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 AC006116.8-202ENST00000587620 1550 ntBASIC30.86■■■□□ 2.53
TOP2AP11388 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC30.86■■■□□ 2.53
TOP2AP11388 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC30.86■■■□□ 2.53
TOP2AP11388 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 MIR770-201ENST00000390219 98 ntBASIC30.86■■■□□ 2.53
TOP2AP11388 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC30.86■■■□□ 2.53
TOP2AP11388 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC30.86■■■□□ 2.53
TOP2AP11388 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC30.86■■■□□ 2.53
TOP2AP11388 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC30.86■■■□□ 2.53
TOP2AP11388 AC011467.4-201ENST00000594891 528 ntBASIC30.86■■■□□ 2.53
TOP2AP11388 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
TOP2AP11388 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC30.86■■■□□ 2.53
TOP2AP11388 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC30.86■■■□□ 2.53
TOP2AP11388 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC30.86■■■□□ 2.53
TOP2AP11388 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TOP2AP11388 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
TOP2AP11388 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TOP2AP11388 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TOP2AP11388 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
TOP2AP11388 MYCLP1-201ENST00000372451 1075 ntBASIC30.85■■■□□ 2.53
TOP2AP11388 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC30.85■■■□□ 2.53
TOP2AP11388 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
TOP2AP11388 IGHV3OR16-6-201ENST00000568775 360 ntBASIC30.85■■■□□ 2.53
TOP2AP11388 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
TOP2AP11388 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
TOP2AP11388 AC116407.2-201ENST00000613639 860 ntBASIC30.85■■■□□ 2.53
TOP2AP11388 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TOP2AP11388 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC30.84■■■□□ 2.53
TOP2AP11388 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TOP2AP11388 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
TOP2AP11388 DDT-204ENST00000404092 805 ntTSL 3 BASIC30.84■■■□□ 2.53
TOP2AP11388 BCRP1-201ENST00000444246 691 ntBASIC30.84■■■□□ 2.53
TOP2AP11388 CCND1-203ENST00000536559 553 ntTSL 3 BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms