Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 LINC00554-201ENST00000564841 3011 ntBASIC18.72■□□□□ 0.59
CHRM1P11229 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRM1P11229 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CHRM1P11229 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CHRM1P11229 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CHRM1P11229 AC106795.1-205ENST00000512851 1056 ntBASIC18.72■□□□□ 0.59
CHRM1P11229 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRM1P11229 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC18.72■□□□□ 0.59
CHRM1P11229 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC18.72■□□□□ 0.59
CHRM1P11229 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHRM1P11229 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 AL592071.1-201ENST00000611956 408 ntBASIC18.72■□□□□ 0.59
CHRM1P11229 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CHRM1P11229 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHRM1P11229 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHRM1P11229 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRM1P11229 KRT89P-201ENST00000620027 1478 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHRM1P11229 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRM1P11229 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRM1P11229 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHRM1P11229 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 AKR1C7P-201ENST00000305623 895 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHRM1P11229 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRM1P11229 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRM1P11229 AC022494.1-201ENST00000466044 728 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRM1P11229 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC18.71■□□□□ 0.59
CHRM1P11229 AL160237.2-201ENST00000556165 472 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC18.71■□□□□ 0.59
CHRM1P11229 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRM1P11229 AC091304.2-201ENST00000564639 760 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 AL353801.3-201ENST00000609898 542 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 AL121772.3-201ENST00000610840 674 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRM1P11229 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 AL357033.4-201ENST00000617703 1807 ntBASIC18.71■□□□□ 0.59
CHRM1P11229 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHRM1P11229 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRM1P11229 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CHRM1P11229 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRM1P11229 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRM1P11229 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.7■□□□□ 0.58
CHRM1P11229 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRM1P11229 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHRM1P11229 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRM1P11229 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.7■□□□□ 0.58
CHRM1P11229 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.7■□□□□ 0.58
CHRM1P11229 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRM1P11229 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRM1P11229 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.7■□□□□ 0.58
CHRM1P11229 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CHRM1P11229 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.7■□□□□ 0.58
CHRM1P11229 SLC25A6P4-201ENST00000586535 553 ntBASIC18.7■□□□□ 0.58
CHRM1P11229 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRM1P11229 AC024563.2-201ENST00000603282 481 ntBASIC18.7■□□□□ 0.58
CHRM1P11229 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHRM1P11229 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRM1P11229 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRM1P11229 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRM1P11229 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRM1P11229 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRM1P11229 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms