Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD28P10747 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD28P10747 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.93□□□□□ -0.18
CD28P10747 AP005117.1-201ENST00000584346 1413 ntBASIC13.93□□□□□ -0.18
CD28P10747 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.93□□□□□ -0.18
CD28P10747 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
CD28P10747 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CD28P10747 MIR574-201ENST00000385209 96 ntBASIC13.93□□□□□ -0.18
CD28P10747 HNRNPDP1-201ENST00000439535 754 ntBASIC13.93□□□□□ -0.18
CD28P10747 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.93□□□□□ -0.18
CD28P10747 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.93□□□□□ -0.18
CD28P10747 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.93□□□□□ -0.18
CD28P10747 GPALPP1-207ENST00000611650 899 ntBASIC13.93□□□□□ -0.18
CD28P10747 MIR7706-201ENST00000613747 67 ntBASIC13.93□□□□□ -0.18
CD28P10747 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.93□□□□□ -0.18
CD28P10747 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.93□□□□□ -0.18
CD28P10747 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.93□□□□□ -0.18
CD28P10747 FAM215A-202ENST00000632077 792 ntBASIC13.93□□□□□ -0.18
CD28P10747 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.93□□□□□ -0.18
CD28P10747 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.93□□□□□ -0.18
CD28P10747 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD28P10747 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 ESPNP-201ENST00000270691 2015 ntBASIC13.93□□□□□ -0.18
CD28P10747 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.93□□□□□ -0.18
CD28P10747 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.93□□□□□ -0.18
CD28P10747 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.93□□□□□ -0.18
CD28P10747 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD28P10747 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.93□□□□□ -0.18
CD28P10747 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD28P10747 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.92□□□□□ -0.18
CD28P10747 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.92□□□□□ -0.18
CD28P10747 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.92□□□□□ -0.18
CD28P10747 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD28P10747 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 PMS2P1-201ENST00000431037 1228 ntBASIC13.92□□□□□ -0.18
CD28P10747 ABCD1P5-201ENST00000445663 754 ntBASIC13.92□□□□□ -0.18
CD28P10747 AC139887.3-201ENST00000568585 713 ntBASIC13.92□□□□□ -0.18
CD28P10747 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.92□□□□□ -0.18
CD28P10747 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CD28P10747 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.92□□□□□ -0.18
CD28P10747 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.92□□□□□ -0.18
CD28P10747 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.92□□□□□ -0.18
CD28P10747 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.92□□□□□ -0.18
CD28P10747 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD28P10747 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD28P10747 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CD28P10747 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CD28P10747 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CD28P10747 RPS2P28-201ENST00000314255 741 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms