Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 TSPY15P-201ENST00000457163 923 ntBASIC17.28■□□□□ 0.36
LINGO3P0C6S8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 AC097488.1-201ENST00000507834 756 ntBASIC17.28■□□□□ 0.36
LINGO3P0C6S8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 SLC25A1P4-201ENST00000567977 778 ntBASIC17.28■□□□□ 0.36
LINGO3P0C6S8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
LINGO3P0C6S8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 AP005242.2-201ENST00000580065 1175 ntBASIC17.27■□□□□ 0.36
LINGO3P0C6S8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.27■□□□□ 0.36
LINGO3P0C6S8 AP000525.1-201ENST00000608286 694 ntBASIC17.27■□□□□ 0.36
LINGO3P0C6S8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.27■□□□□ 0.36
LINGO3P0C6S8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.27■□□□□ 0.35
LINGO3P0C6S8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.27■□□□□ 0.35
LINGO3P0C6S8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINGO3P0C6S8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.27■□□□□ 0.35
LINGO3P0C6S8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINGO3P0C6S8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms