Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 REXO1L11P-201ENST00000620964 1927 ntBASIC18.08■□□□□ 0.48
HLA-DQB2P05538 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 DRAXINP1-201ENST00000437611 948 ntBASIC18.07■□□□□ 0.48
HLA-DQB2P05538 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 AC010460.3-201ENST00000511359 1579 ntBASIC18.07■□□□□ 0.48
HLA-DQB2P05538 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB2P05538 AC125634.1-201ENST00000438758 1403 ntBASIC18.06■□□□□ 0.48
HLA-DQB2P05538 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 LINC00304-203ENST00000565008 1864 ntBASIC18.06■□□□□ 0.48
HLA-DQB2P05538 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 AC246785.2-201ENST00000432512 513 ntBASIC18.06■□□□□ 0.48
HLA-DQB2P05538 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 TOB2P1-201ENST00000469761 992 ntBASIC18.06■□□□□ 0.48
HLA-DQB2P05538 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 AL138831.2-201ENST00000606564 490 ntBASIC18.06■□□□□ 0.48
HLA-DQB2P05538 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 AC093458.2-201ENST00000623150 629 ntBASIC18.06■□□□□ 0.48
HLA-DQB2P05538 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB2P05538 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 AC233702.3-201ENST00000578656 1387 ntBASIC18.05■□□□□ 0.48
HLA-DQB2P05538 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 LINC00265-3P-201ENST00000447588 903 ntBASIC18.05■□□□□ 0.48
HLA-DQB2P05538 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 AC092119.3-201ENST00000612618 583 ntBASIC18.05■□□□□ 0.48
HLA-DQB2P05538 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 AC026471.1-201ENST00000564629 3026 ntBASIC18.05■□□□□ 0.48
HLA-DQB2P05538 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms