Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.27■□□□□ 0.52
MT-CO1P00395 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
MT-CO1P00395 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.27■□□□□ 0.52
MT-CO1P00395 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.27■□□□□ 0.52
MT-CO1P00395 BNIP3P18-201ENST00000593976 575 ntBASIC18.27■□□□□ 0.52
MT-CO1P00395 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.27■□□□□ 0.52
MT-CO1P00395 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-CO1P00395 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
MT-CO1P00395 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-CO1P00395 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
MT-CO1P00395 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MT-CO1P00395 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
MT-CO1P00395 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.27■□□□□ 0.51
MT-CO1P00395 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.27■□□□□ 0.51
MT-CO1P00395 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
MT-CO1P00395 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-CO1P00395 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.27■□□□□ 0.51
MT-CO1P00395 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MT-CO1P00395 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MT-CO1P00395 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-CO1P00395 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 AC068880.1-201ENST00000507289 2297 ntBASIC18.26■□□□□ 0.51
MT-CO1P00395 LTB4R2-202ENST00000528054 3092 ntBASIC18.26■□□□□ 0.51
MT-CO1P00395 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-CO1P00395 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-CO1P00395 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
MT-CO1P00395 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-CO1P00395 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.26■□□□□ 0.51
MT-CO1P00395 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-CO1P00395 KRT18P31-201ENST00000506277 1292 ntBASIC18.26■□□□□ 0.51
MT-CO1P00395 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-CO1P00395 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-CO1P00395 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-CO1P00395 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-CO1P00395 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MT-CO1P00395 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-CO1P00395 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MT-CO1P00395 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.25■□□□□ 0.51
MT-CO1P00395 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MT-CO1P00395 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MT-CO1P00395 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MT-CO1P00395 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 AC067852.2-201ENST00000590513 2313 ntBASIC18.25■□□□□ 0.51
MT-CO1P00395 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MT-CO1P00395 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
MT-CO1P00395 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
MT-CO1P00395 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.25■□□□□ 0.51
MT-CO1P00395 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.25■□□□□ 0.51
MT-CO1P00395 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-CO1P00395 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-CO1P00395 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 AC091304.2-201ENST00000564639 760 ntBASIC18.25■□□□□ 0.51
MT-CO1P00395 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MT-CO1P00395 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MT-CO1P00395 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-CO1P00395 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-CO1P00395 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MT-CO1P00395 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-CO1P00395 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO1P00395 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO1P00395 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
MT-CO1P00395 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
MT-CO1P00395 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MT-CO1P00395 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO1P00395 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO1P00395 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MT-CO1P00395 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MT-CO1P00395 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO1P00395 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
MT-CO1P00395 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-CO1P00395 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-CO1P00395 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms