Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 AC112907.2-201ENST00000448639 330 ntBASIC17.93■□□□□ 0.46
VAPBO95292 AC104076.2-201ENST00000448912 469 ntBASIC17.93■□□□□ 0.46
VAPBO95292 AC092647.4-201ENST00000457211 535 ntBASIC17.93■□□□□ 0.46
VAPBO95292 AP003733.1-201ENST00000491725 852 ntBASIC17.93■□□□□ 0.46
VAPBO95292 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VAPBO95292 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VAPBO95292 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
VAPBO95292 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.92■□□□□ 0.46
VAPBO95292 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
VAPBO95292 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 PRORSD1P-202ENST00000563365 2154 ntBASIC17.92■□□□□ 0.46
VAPBO95292 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.92■□□□□ 0.46
VAPBO95292 MIR662-201ENST00000384847 95 ntBASIC17.92■□□□□ 0.46
VAPBO95292 TSPY12P-201ENST00000421279 868 ntBASIC17.92■□□□□ 0.46
VAPBO95292 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.92■□□□□ 0.46
VAPBO95292 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.92■□□□□ 0.46
VAPBO95292 AC116407.2-201ENST00000613639 860 ntBASIC17.92■□□□□ 0.46
VAPBO95292 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.92■□□□□ 0.46
VAPBO95292 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VAPBO95292 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VAPBO95292 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VAPBO95292 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.92■□□□□ 0.46
VAPBO95292 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VAPBO95292 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VAPBO95292 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
VAPBO95292 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.91■□□□□ 0.46
VAPBO95292 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 IGHGP-201ENST00000390555 1178 ntBASIC17.91■□□□□ 0.46
VAPBO95292 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.91■□□□□ 0.46
VAPBO95292 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.91■□□□□ 0.46
VAPBO95292 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.91■□□□□ 0.46
VAPBO95292 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.91■□□□□ 0.46
VAPBO95292 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.91■□□□□ 0.46
VAPBO95292 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.91■□□□□ 0.46
VAPBO95292 HYMAI.1-201ENST00000620949 238 ntBASIC17.91■□□□□ 0.46
VAPBO95292 AC009154.2-201ENST00000621177 724 ntBASIC17.91■□□□□ 0.46
VAPBO95292 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.91■□□□□ 0.46
VAPBO95292 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.91■□□□□ 0.46
VAPBO95292 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
VAPBO95292 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VAPBO95292 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.91■□□□□ 0.46
VAPBO95292 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VAPBO95292 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 KRT8P47-201ENST00000604727 1398 ntBASIC17.91■□□□□ 0.46
VAPBO95292 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAPBO95292 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.9■□□□□ 0.46
VAPBO95292 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.9■□□□□ 0.46
VAPBO95292 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
VAPBO95292 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VAPBO95292 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.9■□□□□ 0.46
VAPBO95292 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.9■□□□□ 0.46
VAPBO95292 VENTXP5-201ENST00000523979 775 ntBASIC17.9■□□□□ 0.46
VAPBO95292 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.9■□□□□ 0.46
VAPBO95292 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.9■□□□□ 0.46
VAPBO95292 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAPBO95292 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms