Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH8O95206 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH8O95206 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH8O95206 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH8O95206 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH8O95206 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDH8O95206 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH8O95206 RNPS1P1-201ENST00000507437 918 ntBASIC17.78■□□□□ 0.44
PCDH8O95206 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH8O95206 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH8O95206 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH8O95206 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH8O95206 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH8O95206 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH8O95206 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDH8O95206 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
PCDH8O95206 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH8O95206 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
PCDH8O95206 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDH8O95206 REXO1L9P-201ENST00000604264 2108 ntBASIC17.77■□□□□ 0.44
PCDH8O95206 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDH8O95206 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
PCDH8O95206 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH8O95206 AL022342.1-201ENST00000400363 863 ntBASIC17.77■□□□□ 0.44
PCDH8O95206 AL031284.1-201ENST00000419297 478 ntBASIC17.77■□□□□ 0.44
PCDH8O95206 AC096633.1-201ENST00000422446 749 ntBASIC17.77■□□□□ 0.44
PCDH8O95206 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH8O95206 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDH8O95206 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDH8O95206 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDH8O95206 AC148477.8-201ENST00000624298 468 ntBASIC17.77■□□□□ 0.44
PCDH8O95206 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDH8O95206 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.77■□□□□ 0.44
PCDH8O95206 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH8O95206 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDH8O95206 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH8O95206 AC010460.3-201ENST00000511359 1579 ntBASIC17.77■□□□□ 0.44
PCDH8O95206 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
PCDH8O95206 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.77■□□□□ 0.43
PCDH8O95206 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH8O95206 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH8O95206 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PCDH8O95206 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
PCDH8O95206 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
PCDH8O95206 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PCDH8O95206 AC090164.3-201ENST00000610780 2143 ntBASIC17.77■□□□□ 0.43
PCDH8O95206 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH8O95206 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDH8O95206 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDH8O95206 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH8O95206 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH8O95206 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH8O95206 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms