Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.81■□□□□ 0.12
ALX3O95076 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ALX3O95076 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
ALX3O95076 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 UBE2SP1-201ENST00000450587 669 ntBASIC15.81■□□□□ 0.12
ALX3O95076 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.81■□□□□ 0.12
ALX3O95076 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.81■□□□□ 0.12
ALX3O95076 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.81■□□□□ 0.12
ALX3O95076 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.81■□□□□ 0.12
ALX3O95076 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.81■□□□□ 0.12
ALX3O95076 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.81■□□□□ 0.12
ALX3O95076 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.81■□□□□ 0.12
ALX3O95076 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
ALX3O95076 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.81■□□□□ 0.12
ALX3O95076 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ALX3O95076 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.81■□□□□ 0.12
ALX3O95076 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.81■□□□□ 0.12
ALX3O95076 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ALX3O95076 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 TCAF2P1-201ENST00000291129 2421 ntBASIC15.8■□□□□ 0.12
ALX3O95076 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.8■□□□□ 0.12
ALX3O95076 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ALX3O95076 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ALX3O95076 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.8■□□□□ 0.12
ALX3O95076 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.8■□□□□ 0.12
ALX3O95076 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 MIR149-201ENST00000384879 89 ntBASIC15.8■□□□□ 0.12
ALX3O95076 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 AC012618.2-201ENST00000428058 849 ntBASIC15.8■□□□□ 0.12
ALX3O95076 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 AP005242.2-201ENST00000580065 1175 ntBASIC15.8■□□□□ 0.12
ALX3O95076 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.8■□□□□ 0.12
ALX3O95076 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.8■□□□□ 0.12
ALX3O95076 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.8■□□□□ 0.12
ALX3O95076 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
ALX3O95076 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.8■□□□□ 0.12
ALX3O95076 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.8■□□□□ 0.12
ALX3O95076 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 REXO1L9P-201ENST00000604264 2108 ntBASIC15.8■□□□□ 0.12
ALX3O95076 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 AL096828.2-201ENST00000567259 1965 ntBASIC15.8■□□□□ 0.12
ALX3O95076 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALX3O95076 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ALX3O95076 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.8■□□□□ 0.12
ALX3O95076 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 HYMAI-201ENST00000635591 3347 ntBASIC15.79■□□□□ 0.12
ALX3O95076 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.79■□□□□ 0.12
ALX3O95076 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 AC009102.3-201ENST00000623118 1491 ntBASIC15.79■□□□□ 0.12
ALX3O95076 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ALX3O95076 LINC02199-201ENST00000506655 2702 ntBASIC15.79■□□□□ 0.12
ALX3O95076 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
ALX3O95076 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.79■□□□□ 0.12
ALX3O95076 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.79■□□□□ 0.12
ALX3O95076 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.79■□□□□ 0.12
ALX3O95076 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ALX3O95076 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.79■□□□□ 0.12
ALX3O95076 RPS2P55-201ENST00000397318 883 ntBASIC15.79■□□□□ 0.12
ALX3O95076 AC107956.1-201ENST00000494359 873 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms