Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SNCGO76070 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SNCGO76070 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.03□□□□□ -0.48
SNCGO76070 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
SNCGO76070 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.03□□□□□ -0.48
SNCGO76070 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SNCGO76070 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.03□□□□□ -0.48
SNCGO76070 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SNCGO76070 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.02□□□□□ -0.48
SNCGO76070 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SNCGO76070 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SNCGO76070 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SNCGO76070 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SNCGO76070 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SNCGO76070 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.02□□□□□ -0.48
SNCGO76070 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SNCGO76070 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SNCGO76070 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
SNCGO76070 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.02□□□□□ -0.48
SNCGO76070 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
SNCGO76070 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SNCGO76070 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.02□□□□□ -0.49
SNCGO76070 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SNCGO76070 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 RPP21-222ENST00000433076 577 ntTSL 2 BASIC12.02□□□□□ -0.49
SNCGO76070 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.02□□□□□ -0.49
SNCGO76070 AC023632.3-201ENST00000521633 145 ntBASIC12.02□□□□□ -0.49
SNCGO76070 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.02□□□□□ -0.49
SNCGO76070 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.02□□□□□ -0.49
SNCGO76070 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.02□□□□□ -0.49
SNCGO76070 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.02□□□□□ -0.49
SNCGO76070 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.02□□□□□ -0.49
SNCGO76070 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.02□□□□□ -0.49
SNCGO76070 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.02□□□□□ -0.49
SNCGO76070 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.02□□□□□ -0.49
SNCGO76070 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.02□□□□□ -0.49
SNCGO76070 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SNCGO76070 CYP21A1P-202ENST00000354927 1481 ntBASIC12.02□□□□□ -0.49
SNCGO76070 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SNCGO76070 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SNCGO76070 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.01□□□□□ -0.49
SNCGO76070 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SNCGO76070 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.01□□□□□ -0.49
SNCGO76070 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SNCGO76070 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 AL023806.1-201ENST00000603994 1649 ntBASIC12.01□□□□□ -0.49
SNCGO76070 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SNCGO76070 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.01□□□□□ -0.49
SNCGO76070 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.01□□□□□ -0.49
SNCGO76070 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
SNCGO76070 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.01□□□□□ -0.49
SNCGO76070 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SNCGO76070 NT5C3AP1-201ENST00000394500 1012 ntBASIC12.01□□□□□ -0.49
SNCGO76070 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SNCGO76070 QDPR-206ENST00000508623 601 ntTSL 3 BASIC12.01□□□□□ -0.49
SNCGO76070 AC012414.1-201ENST00000556676 535 ntBASIC12.01□□□□□ -0.49
SNCGO76070 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms