Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDH16O75309 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CDH16O75309 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDH16O75309 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH16O75309 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH16O75309 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CDH16O75309 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH16O75309 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CDH16O75309 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH16O75309 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH16O75309 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CDH16O75309 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH16O75309 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH16O75309 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH16O75309 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH16O75309 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.02■□□□□ 0.48
CDH16O75309 NUDT16P1-203ENST00000513809 620 ntBASIC18.02■□□□□ 0.48
CDH16O75309 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.02■□□□□ 0.48
CDH16O75309 AC008687.5-201ENST00000593746 558 ntBASIC18.02■□□□□ 0.48
CDH16O75309 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH16O75309 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH16O75309 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CDH16O75309 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CDH16O75309 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.02■□□□□ 0.47
CDH16O75309 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.02■□□□□ 0.47
CDH16O75309 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CDH16O75309 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH16O75309 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.02■□□□□ 0.47
CDH16O75309 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH16O75309 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CDH16O75309 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.02■□□□□ 0.47
CDH16O75309 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDH16O75309 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH16O75309 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH16O75309 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 AGGF1P2-201ENST00000426656 2106 ntBASIC18.01■□□□□ 0.47
CDH16O75309 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH16O75309 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.01■□□□□ 0.47
CDH16O75309 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH16O75309 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH16O75309 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH16O75309 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH16O75309 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDH16O75309 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDH16O75309 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CDH16O75309 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDH16O75309 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 MME-217ENST00000616757 1315 ntTSL 5 BASIC18■□□□□ 0.47
CDH16O75309 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18■□□□□ 0.47
CDH16O75309 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18■□□□□ 0.47
CDH16O75309 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDH16O75309 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CDH16O75309 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18■□□□□ 0.47
CDH16O75309 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18■□□□□ 0.47
CDH16O75309 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18■□□□□ 0.47
CDH16O75309 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18■□□□□ 0.47
CDH16O75309 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18■□□□□ 0.47
CDH16O75309 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18■□□□□ 0.47
CDH16O75309 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CDH16O75309 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18■□□□□ 0.47
CDH16O75309 AC009949.1-201ENST00000623048 1830 ntBASIC18■□□□□ 0.47
CDH16O75309 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH16O75309 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH16O75309 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH16O75309 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms