Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LDB3O75112 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.78■□□□□ 0.28
LDB3O75112 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.78■□□□□ 0.28
LDB3O75112 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.78■□□□□ 0.28
LDB3O75112 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LDB3O75112 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 VENTXP7-201ENST00000475503 772 ntBASIC16.78■□□□□ 0.28
LDB3O75112 AP000867.3-201ENST00000524675 377 ntBASIC16.78■□□□□ 0.28
LDB3O75112 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.78■□□□□ 0.28
LDB3O75112 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.78■□□□□ 0.28
LDB3O75112 AL353801.3-201ENST00000609898 542 ntBASIC16.78■□□□□ 0.28
LDB3O75112 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.78■□□□□ 0.28
LDB3O75112 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.78■□□□□ 0.28
LDB3O75112 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB3O75112 AC134043.2-201ENST00000624206 2238 ntBASIC16.78■□□□□ 0.28
LDB3O75112 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.78■□□□□ 0.28
LDB3O75112 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.78■□□□□ 0.28
LDB3O75112 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.78■□□□□ 0.28
LDB3O75112 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
LDB3O75112 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LDB3O75112 FZD10-202ENST00000539839 3282 ntBASIC16.78■□□□□ 0.28
LDB3O75112 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
LDB3O75112 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.77■□□□□ 0.28
LDB3O75112 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LDB3O75112 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
LDB3O75112 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
LDB3O75112 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
LDB3O75112 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LDB3O75112 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LDB3O75112 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB3O75112 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.77■□□□□ 0.28
LDB3O75112 HCG4P8-203ENST00000443049 980 ntBASIC16.77■□□□□ 0.28
LDB3O75112 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LDB3O75112 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB3O75112 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.77■□□□□ 0.28
LDB3O75112 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
LDB3O75112 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.77■□□□□ 0.28
LDB3O75112 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.77■□□□□ 0.28
LDB3O75112 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.77■□□□□ 0.28
LDB3O75112 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.77■□□□□ 0.28
LDB3O75112 AC005336.2-201ENST00000593183 939 ntBASIC16.77■□□□□ 0.28
LDB3O75112 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.77■□□□□ 0.28
LDB3O75112 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
LDB3O75112 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LDB3O75112 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB3O75112 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB3O75112 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
LDB3O75112 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LDB3O75112 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB3O75112 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LDB3O75112 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
LDB3O75112 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB3O75112 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB3O75112 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB3O75112 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB3O75112 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB3O75112 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB3O75112 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LDB3O75112 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LDB3O75112 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB3O75112 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB3O75112 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.76■□□□□ 0.27
LDB3O75112 AC246785.2-201ENST00000432512 513 ntBASIC16.76■□□□□ 0.27
LDB3O75112 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms