Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 NFIC-211ENST00000641145 8399 ntBASIC13.35□□□□□ -0.27
SH2D1AO60880 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 FAM197Y1-201ENST00000421178 764 ntBASIC13.35□□□□□ -0.27
SH2D1AO60880 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.35□□□□□ -0.27
SH2D1AO60880 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.35□□□□□ -0.27
SH2D1AO60880 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.35□□□□□ -0.27
SH2D1AO60880 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 AC006058.3-201ENST00000606217 1069 ntBASIC13.35□□□□□ -0.27
SH2D1AO60880 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SH2D1AO60880 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SH2D1AO60880 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SH2D1AO60880 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SH2D1AO60880 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.35□□□□□ -0.27
SH2D1AO60880 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SH2D1AO60880 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.34□□□□□ -0.27
SH2D1AO60880 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 AC097488.1-201ENST00000507834 756 ntBASIC13.34□□□□□ -0.27
SH2D1AO60880 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.34□□□□□ -0.27
SH2D1AO60880 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.34□□□□□ -0.27
SH2D1AO60880 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SH2D1AO60880 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.34□□□□□ -0.27
SH2D1AO60880 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
SH2D1AO60880 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SH2D1AO60880 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.33□□□□□ -0.27
SH2D1AO60880 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.27
SH2D1AO60880 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.27
SH2D1AO60880 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SH2D1AO60880 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.33□□□□□ -0.27
SH2D1AO60880 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SH2D1AO60880 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SH2D1AO60880 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
SH2D1AO60880 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SH2D1AO60880 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.33□□□□□ -0.28
SH2D1AO60880 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.33□□□□□ -0.28
SH2D1AO60880 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms