Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.74■□□□□ 0.91
CTNND1O60716 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CTNND1O60716 AC004967.1-201ENST00000453589 447 ntBASIC20.74■□□□□ 0.91
CTNND1O60716 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.74■□□□□ 0.91
CTNND1O60716 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.74■□□□□ 0.91
CTNND1O60716 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.74■□□□□ 0.91
CTNND1O60716 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.74■□□□□ 0.91
CTNND1O60716 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CTNND1O60716 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CTNND1O60716 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNND1O60716 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CTNND1O60716 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.73■□□□□ 0.91
CTNND1O60716 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.73■□□□□ 0.91
CTNND1O60716 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.73■□□□□ 0.91
CTNND1O60716 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CTNND1O60716 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.73■□□□□ 0.91
CTNND1O60716 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 AP000974.1-201ENST00000623909 2387 ntBASIC20.73■□□□□ 0.91
CTNND1O60716 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CTNND1O60716 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CTNND1O60716 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTNND1O60716 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNND1O60716 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTNND1O60716 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNND1O60716 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTNND1O60716 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CTNND1O60716 RPS8P6-201ENST00000426177 609 ntBASIC20.72■□□□□ 0.91
CTNND1O60716 KRT18P2-201ENST00000447938 1258 ntBASIC20.72■□□□□ 0.91
CTNND1O60716 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNND1O60716 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.72■□□□□ 0.91
CTNND1O60716 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.72■□□□□ 0.91
CTNND1O60716 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.72■□□□□ 0.91
CTNND1O60716 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.72■□□□□ 0.91
CTNND1O60716 AC134684.3-201ENST00000641758 218 ntBASIC20.72■□□□□ 0.91
CTNND1O60716 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNND1O60716 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.72■□□□□ 0.91
CTNND1O60716 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CTNND1O60716 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNND1O60716 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.72■□□□□ 0.91
CTNND1O60716 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.71■□□□□ 0.91
CTNND1O60716 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CTNND1O60716 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CTNND1O60716 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.71■□□□□ 0.91
CTNND1O60716 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.71■□□□□ 0.91
CTNND1O60716 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.71■□□□□ 0.91
CTNND1O60716 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CTNND1O60716 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CTNND1O60716 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.71■□□□□ 0.91
CTNND1O60716 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 AC006504.4-201ENST00000592118 1568 ntBASIC20.71■□□□□ 0.91
CTNND1O60716 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNND1O60716 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms