Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.83■□□□□ 0.28
URB1O60287 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.82■□□□□ 0.28
URB1O60287 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 AC005498.2-205ENST00000593218 784 ntBASIC16.82■□□□□ 0.28
URB1O60287 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.82■□□□□ 0.28
URB1O60287 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
URB1O60287 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 AC079776.2-201ENST00000641154 1609 ntBASIC16.82■□□□□ 0.28
URB1O60287 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
URB1O60287 AC073621.1-201ENST00000392730 636 ntBASIC16.82■□□□□ 0.28
URB1O60287 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 VN2R19P-201ENST00000442399 1052 ntBASIC16.82■□□□□ 0.28
URB1O60287 CEND1P1-201ENST00000451006 455 ntBASIC16.82■□□□□ 0.28
URB1O60287 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.82■□□□□ 0.28
URB1O60287 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
URB1O60287 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
URB1O60287 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
URB1O60287 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.82■□□□□ 0.28
URB1O60287 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
URB1O60287 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
URB1O60287 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.82■□□□□ 0.28
URB1O60287 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.82■□□□□ 0.28
URB1O60287 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.81■□□□□ 0.28
URB1O60287 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.81■□□□□ 0.28
URB1O60287 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.81■□□□□ 0.28
URB1O60287 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.81■□□□□ 0.28
URB1O60287 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.81■□□□□ 0.28
URB1O60287 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
URB1O60287 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
URB1O60287 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.81■□□□□ 0.28
URB1O60287 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
URB1O60287 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.8■□□□□ 0.28
URB1O60287 AC005034.1-201ENST00000426657 489 ntBASIC16.8■□□□□ 0.28
URB1O60287 PAWRP1-201ENST00000451083 565 ntBASIC16.8■□□□□ 0.28
URB1O60287 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.8■□□□□ 0.28
URB1O60287 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.8■□□□□ 0.28
URB1O60287 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
URB1O60287 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.8■□□□□ 0.28
URB1O60287 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.8■□□□□ 0.28
URB1O60287 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
URB1O60287 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 AC005082.1-201ENST00000413042 2259 ntBASIC16.8■□□□□ 0.28
URB1O60287 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
URB1O60287 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms