Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.8■□□□□ 0.12
SGCEO43556 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.8■□□□□ 0.12
SGCEO43556 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.8■□□□□ 0.12
SGCEO43556 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.8■□□□□ 0.12
SGCEO43556 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.8■□□□□ 0.12
SGCEO43556 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.8■□□□□ 0.12
SGCEO43556 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.8■□□□□ 0.12
SGCEO43556 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SGCEO43556 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.8■□□□□ 0.12
SGCEO43556 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SGCEO43556 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.8■□□□□ 0.12
SGCEO43556 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SGCEO43556 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SGCEO43556 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SGCEO43556 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SGCEO43556 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGCEO43556 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.79■□□□□ 0.12
SGCEO43556 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.79■□□□□ 0.12
SGCEO43556 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 LINC00167-201ENST00000530583 1419 ntBASIC15.79■□□□□ 0.12
SGCEO43556 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.79■□□□□ 0.12
SGCEO43556 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 AC022898.2-201ENST00000616822 1312 ntBASIC15.79■□□□□ 0.12
SGCEO43556 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.79■□□□□ 0.12
SGCEO43556 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 TMPOP1-202ENST00000424642 1267 ntBASIC15.79■□□□□ 0.12
SGCEO43556 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.79■□□□□ 0.12
SGCEO43556 AC112907.2-201ENST00000448639 330 ntBASIC15.79■□□□□ 0.12
SGCEO43556 KRT18P38-201ENST00000449496 1282 ntBASIC15.79■□□□□ 0.12
SGCEO43556 DUTP2-201ENST00000519164 463 ntBASIC15.79■□□□□ 0.12
SGCEO43556 LINC01238-205ENST00000567549 1107 ntBASIC15.79■□□□□ 0.12
SGCEO43556 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.79■□□□□ 0.12
SGCEO43556 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 AC141586.5-201ENST00000624546 2050 ntBASIC15.79■□□□□ 0.12
SGCEO43556 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGCEO43556 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.78■□□□□ 0.12
SGCEO43556 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
SGCEO43556 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SGCEO43556 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 AC009053.2-201ENST00000563701 2365 ntBASIC15.78■□□□□ 0.12
SGCEO43556 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.78■□□□□ 0.12
SGCEO43556 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.78■□□□□ 0.12
SGCEO43556 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.78■□□□□ 0.12
SGCEO43556 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.78■□□□□ 0.12
SGCEO43556 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.78■□□□□ 0.12
SGCEO43556 AC063952.2-201ENST00000498792 1227 ntBASIC15.78■□□□□ 0.12
SGCEO43556 ZNF444P1-201ENST00000559497 298 ntBASIC15.78■□□□□ 0.12
SGCEO43556 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.78■□□□□ 0.12
SGCEO43556 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.78■□□□□ 0.12
SGCEO43556 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
SGCEO43556 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.78■□□□□ 0.12
SGCEO43556 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SGCEO43556 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGCEO43556 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms