Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.99■□□□□ 0.79
MSH4O15457 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.99■□□□□ 0.79
MSH4O15457 AF238378.1-201ENST00000526806 358 ntBASIC19.99■□□□□ 0.79
MSH4O15457 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.99■□□□□ 0.79
MSH4O15457 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.99■□□□□ 0.79
MSH4O15457 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
MSH4O15457 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MSH4O15457 AC006116.8-202ENST00000587620 1550 ntBASIC19.99■□□□□ 0.79
MSH4O15457 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.99■□□□□ 0.79
MSH4O15457 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MSH4O15457 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.98■□□□□ 0.79
MSH4O15457 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.98■□□□□ 0.79
MSH4O15457 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.98■□□□□ 0.79
MSH4O15457 BX276092.7-203ENST00000637198 1536 ntBASIC19.98■□□□□ 0.79
MSH4O15457 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.98■□□□□ 0.79
MSH4O15457 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.98■□□□□ 0.79
MSH4O15457 TPM4P1-201ENST00000436100 807 ntBASIC19.98■□□□□ 0.79
MSH4O15457 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.98■□□□□ 0.79
MSH4O15457 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.98■□□□□ 0.79
MSH4O15457 SAPCD2P3-201ENST00000455031 850 ntBASIC19.98■□□□□ 0.79
MSH4O15457 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.98■□□□□ 0.79
MSH4O15457 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.98■□□□□ 0.79
MSH4O15457 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.98■□□□□ 0.79
MSH4O15457 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.98■□□□□ 0.79
MSH4O15457 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
MSH4O15457 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.98■□□□□ 0.79
MSH4O15457 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.98■□□□□ 0.79
MSH4O15457 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MSH4O15457 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSH4O15457 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MSH4O15457 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.97■□□□□ 0.79
MSH4O15457 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
MSH4O15457 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.97■□□□□ 0.79
MSH4O15457 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 AC004870.1-201ENST00000315132 882 ntBASIC19.97■□□□□ 0.79
MSH4O15457 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.97■□□□□ 0.79
MSH4O15457 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 ABCD1P5-201ENST00000445663 754 ntBASIC19.97■□□□□ 0.79
MSH4O15457 AC079781.3-201ENST00000449110 356 ntBASIC19.97■□□□□ 0.79
MSH4O15457 AC106795.1-205ENST00000512851 1056 ntBASIC19.97■□□□□ 0.79
MSH4O15457 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.97■□□□□ 0.79
MSH4O15457 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.97■□□□□ 0.79
MSH4O15457 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.97■□□□□ 0.79
MSH4O15457 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.97■□□□□ 0.79
MSH4O15457 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.97■□□□□ 0.79
MSH4O15457 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.97■□□□□ 0.79
MSH4O15457 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.97■□□□□ 0.79
MSH4O15457 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.97■□□□□ 0.79
MSH4O15457 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.97■□□□□ 0.79
MSH4O15457 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.97■□□□□ 0.79
MSH4O15457 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSH4O15457 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
MSH4O15457 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.96■□□□□ 0.79
MSH4O15457 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
MSH4O15457 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.96■□□□□ 0.79
MSH4O15457 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 AD001527.2-201ENST00000622994 785 ntBASIC19.96■□□□□ 0.79
MSH4O15457 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MSH4O15457 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.96■□□□□ 0.79
MSH4O15457 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSH4O15457 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.96■□□□□ 0.79
MSH4O15457 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.96■□□□□ 0.79
MSH4O15457 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
MSH4O15457 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
MSH4O15457 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.96■□□□□ 0.79
MSH4O15457 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.96■□□□□ 0.79
MSH4O15457 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MSH4O15457 REXO1L11P-201ENST00000620964 1927 ntBASIC19.96■□□□□ 0.79
MSH4O15457 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms