Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
FOXN1O15353 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXN1O15353 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXN1O15353 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 CEND1P1-201ENST00000451006 455 ntBASIC21.24■□□□□ 0.99
FOXN1O15353 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.24■□□□□ 0.99
FOXN1O15353 MEIS3P1-201ENST00000495167 958 ntBASIC21.24■□□□□ 0.99
FOXN1O15353 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.24■□□□□ 0.99
FOXN1O15353 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 AL078644.1-201ENST00000609881 752 ntBASIC21.24■□□□□ 0.99
FOXN1O15353 AC092865.6-201ENST00000642101 219 ntBASIC21.24■□□□□ 0.99
FOXN1O15353 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXN1O15353 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
FOXN1O15353 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FOXN1O15353 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.24■□□□□ 0.99
FOXN1O15353 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXN1O15353 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN1O15353 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN1O15353 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
FOXN1O15353 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN1O15353 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXN1O15353 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXN1O15353 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXN1O15353 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.23■□□□□ 0.99
FOXN1O15353 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.23■□□□□ 0.99
FOXN1O15353 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXN1O15353 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN1O15353 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN1O15353 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN1O15353 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXN1O15353 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXN1O15353 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
FOXN1O15353 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN1O15353 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN1O15353 INTS4P1-201ENST00000438455 1935 ntBASIC21.22■□□□□ 0.99
FOXN1O15353 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXN1O15353 AL499627.1-201ENST00000569373 2188 ntBASIC21.22■□□□□ 0.99
FOXN1O15353 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN1O15353 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.22■□□□□ 0.99
FOXN1O15353 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN1O15353 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXN1O15353 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXN1O15353 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN1O15353 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
FOXN1O15353 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
FOXN1O15353 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXN1O15353 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXN1O15353 AC126763.1-201ENST00000552015 2118 ntBASIC21.22■□□□□ 0.99
FOXN1O15353 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FOXN1O15353 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
FOXN1O15353 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
FOXN1O15353 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXN1O15353 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXN1O15353 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXN1O15353 GAPDHP21-201ENST00000450301 1010 ntBASIC21.21■□□□□ 0.99
FOXN1O15353 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXN1O15353 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXN1O15353 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXN1O15353 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXN1O15353 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 AC135050.7-201ENST00000624508 2218 ntBASIC21.21■□□□□ 0.99
FOXN1O15353 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXN1O15353 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXN1O15353 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
FOXN1O15353 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXN1O15353 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXN1O15353 KRT89P-201ENST00000620027 1478 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms