Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TRANK1O15050 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.57■□□□□ 0.56
TRANK1O15050 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.57■□□□□ 0.56
TRANK1O15050 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRANK1O15050 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TRANK1O15050 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRANK1O15050 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.57■□□□□ 0.56
TRANK1O15050 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRANK1O15050 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRANK1O15050 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRANK1O15050 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TRANK1O15050 INGX-202ENST00000489074 768 ntBASIC18.57■□□□□ 0.56
TRANK1O15050 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRANK1O15050 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.57■□□□□ 0.56
TRANK1O15050 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRANK1O15050 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRANK1O15050 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.57■□□□□ 0.56
TRANK1O15050 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.57■□□□□ 0.56
TRANK1O15050 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRANK1O15050 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRANK1O15050 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 OR8S1-201ENST00000310194 1080 ntBASIC18.56■□□□□ 0.56
TRANK1O15050 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.56■□□□□ 0.56
TRANK1O15050 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.56■□□□□ 0.56
TRANK1O15050 GMCL1P1-201ENST00000463439 1581 ntBASIC18.56■□□□□ 0.56
TRANK1O15050 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.56■□□□□ 0.56
TRANK1O15050 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.56■□□□□ 0.56
TRANK1O15050 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.56■□□□□ 0.56
TRANK1O15050 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRANK1O15050 SPDYE22P-201ENST00000582158 798 ntBASIC18.56■□□□□ 0.56
TRANK1O15050 REXO1L3P-201ENST00000622202 1288 ntBASIC18.56■□□□□ 0.56
TRANK1O15050 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.56■□□□□ 0.56
TRANK1O15050 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRANK1O15050 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.56■□□□□ 0.56
TRANK1O15050 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRANK1O15050 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
TRANK1O15050 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRANK1O15050 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.55■□□□□ 0.56
TRANK1O15050 TERF1P3-201ENST00000505638 1227 ntBASIC18.55■□□□□ 0.56
TRANK1O15050 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.55■□□□□ 0.56
TRANK1O15050 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
TRANK1O15050 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 FO538757.1-201ENST00000623083 1397 ntBASIC18.55■□□□□ 0.56
TRANK1O15050 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TRANK1O15050 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.55■□□□□ 0.56
TRANK1O15050 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.55■□□□□ 0.56
TRANK1O15050 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.55■□□□□ 0.56
TRANK1O15050 TIMM8BP1-201ENST00000452384 211 ntBASIC18.55■□□□□ 0.56
TRANK1O15050 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.55■□□□□ 0.56
TRANK1O15050 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRANK1O15050 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.55■□□□□ 0.56
TRANK1O15050 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.54■□□□□ 0.56
TRANK1O15050 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
TRANK1O15050 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRANK1O15050 AC067863.1-201ENST00000494933 530 ntBASIC18.54■□□□□ 0.56
TRANK1O15050 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.54■□□□□ 0.56
TRANK1O15050 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.54■□□□□ 0.56
TRANK1O15050 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.54■□□□□ 0.56
TRANK1O15050 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.54■□□□□ 0.56
TRANK1O15050 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRANK1O15050 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms