Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CHD2O14647 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD2O14647 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHD2O14647 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC24.57■■□□□ 1.52
CHD2O14647 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD2O14647 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD2O14647 AC069335.1-201ENST00000489972 472 ntBASIC24.57■■□□□ 1.52
CHD2O14647 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHD2O14647 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHD2O14647 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD2O14647 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD2O14647 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD2O14647 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD2O14647 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CHD2O14647 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD2O14647 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC24.57■■□□□ 1.52
CHD2O14647 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CHD2O14647 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC24.56■■□□□ 1.52
CHD2O14647 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 LINC00982-205ENST00000420957 435 ntBASIC24.56■■□□□ 1.52
CHD2O14647 AC087163.2-201ENST00000457299 853 ntBASIC24.56■■□□□ 1.52
CHD2O14647 DUTP2-201ENST00000519164 463 ntBASIC24.56■■□□□ 1.52
CHD2O14647 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD2O14647 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CHD2O14647 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD2O14647 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CHD2O14647 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CHD2O14647 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC24.56■■□□□ 1.52
CHD2O14647 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD2O14647 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC24.56■■□□□ 1.52
CHD2O14647 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC24.56■■□□□ 1.52
CHD2O14647 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC24.55■■□□□ 1.52
CHD2O14647 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD2O14647 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHD2O14647 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHD2O14647 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD2O14647 FAM207CP-201ENST00000443486 507 ntBASIC24.55■■□□□ 1.52
CHD2O14647 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC24.55■■□□□ 1.52
CHD2O14647 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHD2O14647 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC24.55■■□□□ 1.52
CHD2O14647 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.55■■□□□ 1.52
CHD2O14647 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC24.55■■□□□ 1.52
CHD2O14647 AC100803.2-201ENST00000562459 1963 ntBASIC24.55■■□□□ 1.52
CHD2O14647 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHD2O14647 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
CHD2O14647 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD2O14647 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC24.54■■□□□ 1.52
CHD2O14647 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 AC140658.5-201ENST00000438532 169 ntBASIC24.54■■□□□ 1.52
CHD2O14647 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC24.54■■□□□ 1.52
CHD2O14647 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 AC026120.1-201ENST00000611536 926 ntBASIC24.54■■□□□ 1.52
CHD2O14647 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC24.54■■□□□ 1.52
CHD2O14647 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CHD2O14647 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 THTPA-204ENST00000554970 569 ntTSL 4 BASIC24.54■■□□□ 1.52
CHD2O14647 THTPA-206ENST00000556015 535 ntTSL 3 BASIC24.54■■□□□ 1.52
CHD2O14647 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC24.54■■□□□ 1.52
CHD2O14647 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC24.54■■□□□ 1.52
CHD2O14647 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CHD2O14647 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD2O14647 HARS-201ENST00000307633 1780 ntTSL 2 BASIC24.53■■□□□ 1.52
CHD2O14647 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC24.53■■□□□ 1.52
CHD2O14647 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC24.53■■□□□ 1.52
CHD2O14647 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD2O14647 BX276092.7-203ENST00000637198 1536 ntBASIC24.53■■□□□ 1.52
CHD2O14647 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHD2O14647 RNA5SP421-201ENST00000516864 134 ntBASIC24.53■■□□□ 1.52
CHD2O14647 RPL28-209ENST00000560055 670 ntTSL 3 BASIC24.53■■□□□ 1.52
CHD2O14647 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD2O14647 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD2O14647 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CHD2O14647 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CHD2O14647 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD2O14647 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD2O14647 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD2O14647 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CHD2O14647 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD2O14647 NABP1-203ENST00000409510 843 ntTSL 5 BASIC24.52■■□□□ 1.52
CHD2O14647 AC055876.3-201ENST00000431496 288 ntBASIC24.52■■□□□ 1.52
CHD2O14647 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC24.52■■□□□ 1.52
CHD2O14647 TSPY16P-201ENST00000449843 468 ntBASIC24.52■■□□□ 1.52
CHD2O14647 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms