Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN5O00501 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN5O00501 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLDN5O00501 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CLDN5O00501 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN5O00501 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.79■□□□□ 0.6
CLDN5O00501 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLDN5O00501 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN5O00501 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN5O00501 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN5O00501 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLDN5O00501 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN5O00501 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.79■□□□□ 0.6
CLDN5O00501 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN5O00501 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN5O00501 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN5O00501 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN5O00501 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN5O00501 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 FAM220CP-201ENST00000395253 831 ntBASIC18.78■□□□□ 0.6
CLDN5O00501 SAPCD2P3-201ENST00000455031 850 ntBASIC18.78■□□□□ 0.6
CLDN5O00501 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN5O00501 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.78■□□□□ 0.6
CLDN5O00501 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CLDN5O00501 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN5O00501 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.78■□□□□ 0.6
CLDN5O00501 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN5O00501 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 AP001269.4-201ENST00000609611 512 ntBASIC18.78■□□□□ 0.6
CLDN5O00501 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN5O00501 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 SIRPAP1-201ENST00000448467 1770 ntBASIC18.78■□□□□ 0.6
CLDN5O00501 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN5O00501 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN5O00501 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN5O00501 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN5O00501 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CLDN5O00501 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN5O00501 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 AC018470.1-201ENST00000624790 3129 ntBASIC18.77■□□□□ 0.6
CLDN5O00501 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN5O00501 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.77■□□□□ 0.6
CLDN5O00501 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN5O00501 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN5O00501 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN5O00501 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN5O00501 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms