Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RTCAO00442 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RTCAO00442 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.02■□□□□ 0.32
RTCAO00442 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RTCAO00442 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.02■□□□□ 0.32
RTCAO00442 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.02■□□□□ 0.32
RTCAO00442 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.02■□□□□ 0.32
RTCAO00442 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RTCAO00442 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTCAO00442 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTCAO00442 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTCAO00442 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTCAO00442 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.02■□□□□ 0.31
RTCAO00442 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
RTCAO00442 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTCAO00442 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTCAO00442 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RTCAO00442 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTCAO00442 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.02■□□□□ 0.31
RTCAO00442 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RTCAO00442 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.01■□□□□ 0.31
RTCAO00442 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.01■□□□□ 0.31
RTCAO00442 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.01■□□□□ 0.31
RTCAO00442 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RTCAO00442 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.01■□□□□ 0.31
RTCAO00442 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RTCAO00442 LINC00896-202ENST00000609602 2128 ntBASIC17.01■□□□□ 0.31
RTCAO00442 AC116407.4-201ENST00000623319 1061 ntBASIC17.01■□□□□ 0.31
RTCAO00442 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.01■□□□□ 0.31
RTCAO00442 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.01■□□□□ 0.31
RTCAO00442 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RTCAO00442 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RTCAO00442 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.01■□□□□ 0.31
RTCAO00442 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RTCAO00442 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTCAO00442 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTCAO00442 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17■□□□□ 0.31
RTCAO00442 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTCAO00442 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17■□□□□ 0.31
RTCAO00442 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17■□□□□ 0.31
RTCAO00442 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17■□□□□ 0.31
RTCAO00442 KRT8P26-201ENST00000534154 1276 ntBASIC17■□□□□ 0.31
RTCAO00442 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17■□□□□ 0.31
RTCAO00442 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17■□□□□ 0.31
RTCAO00442 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17■□□□□ 0.31
RTCAO00442 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RTCAO00442 AL592071.1-201ENST00000611956 408 ntBASIC17■□□□□ 0.31
RTCAO00442 IGHV3-41-201ENST00000613121 348 ntBASIC17■□□□□ 0.31
RTCAO00442 AC124864.1-201ENST00000623408 392 ntBASIC17■□□□□ 0.31
RTCAO00442 AL358472.4-201ENST00000633140 710 ntBASIC17■□□□□ 0.31
RTCAO00442 ANKRD20A8P-203ENST00000641373 517 ntBASIC17■□□□□ 0.31
RTCAO00442 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17■□□□□ 0.31
RTCAO00442 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17■□□□□ 0.31
RTCAO00442 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 IER3-202ENST00000376377 1350 ntBASIC17■□□□□ 0.31
RTCAO00442 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17■□□□□ 0.31
RTCAO00442 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17■□□□□ 0.31
RTCAO00442 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTCAO00442 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms