Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC138932.1-201ENST00000534164 6830 ntBASIC19.01■□□□□ 0.63
O00370 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.01■□□□□ 0.63
O00370 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.01■□□□□ 0.63
O00370 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19■□□□□ 0.63
O00370 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
O00370 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19■□□□□ 0.63
O00370 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
O00370 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
O00370 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19■□□□□ 0.63
O00370 UPK3BP1-201ENST00000428678 509 ntBASIC19■□□□□ 0.63
O00370 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19■□□□□ 0.63
O00370 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19■□□□□ 0.63
O00370 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19■□□□□ 0.63
O00370 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19■□□□□ 0.63
O00370 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19■□□□□ 0.63
O00370 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19■□□□□ 0.63
O00370 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19■□□□□ 0.63
O00370 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 AC090340.1-201ENST00000620778 4980 ntBASIC19■□□□□ 0.63
O00370 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19■□□□□ 0.63
O00370 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19■□□□□ 0.63
O00370 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
O00370 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.99■□□□□ 0.63
O00370 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.99■□□□□ 0.63
O00370 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
O00370 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 ATP5G2P1-201ENST00000433580 426 ntBASIC18.99■□□□□ 0.63
O00370 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.99■□□□□ 0.63
O00370 DRAXINP1-201ENST00000437611 948 ntBASIC18.99■□□□□ 0.63
O00370 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.99■□□□□ 0.63
O00370 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.99■□□□□ 0.63
O00370 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.99■□□□□ 0.63
O00370 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.99■□□□□ 0.63
O00370 MIR3180-1-201ENST00000580374 94 ntBASIC18.99■□□□□ 0.63
O00370 MIR3180-3-201ENST00000584616 94 ntBASIC18.99■□□□□ 0.63
O00370 AP002414.4-201ENST00000589764 1148 ntBASIC18.99■□□□□ 0.63
O00370 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
O00370 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
O00370 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
O00370 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
O00370 KRT18P1-202ENST00000452408 1331 ntBASIC18.99■□□□□ 0.63
O00370 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
O00370 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
O00370 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
O00370 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
O00370 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.98■□□□□ 0.63
O00370 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.98■□□□□ 0.63
O00370 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.98■□□□□ 0.63
O00370 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.98■□□□□ 0.63
O00370 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.98■□□□□ 0.63
O00370 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.98■□□□□ 0.63
O00370 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.98■□□□□ 0.63
O00370 TPSP2-201ENST00000561760 610 ntBASIC18.98■□□□□ 0.63
O00370 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.98■□□□□ 0.63
O00370 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.98■□□□□ 0.63
O00370 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.98■□□□□ 0.63
O00370 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms