Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 HCG11-201ENST00000411553 5696 ntBASIC19.24■□□□□ 0.67
USP27XA6NNY8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 MESTP1-201ENST00000404287 994 ntBASIC19.24■□□□□ 0.67
USP27XA6NNY8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 AC026271.3-201ENST00000571884 352 ntBASIC19.24■□□□□ 0.67
USP27XA6NNY8 CR392000.1-201ENST00000624770 1228 ntBASIC19.24■□□□□ 0.67
USP27XA6NNY8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP27XA6NNY8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.23■□□□□ 0.67
USP27XA6NNY8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 AL662844.4-201ENST00000606367 2838 ntBASIC19.23■□□□□ 0.67
USP27XA6NNY8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 AP003097.1-201ENST00000530657 1135 ntBASIC19.23■□□□□ 0.67
USP27XA6NNY8 AC104771.1-201ENST00000603335 964 ntBASIC19.23■□□□□ 0.67
USP27XA6NNY8 LINC01451-201ENST00000623792 534 ntBASIC19.23■□□□□ 0.67
USP27XA6NNY8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 AC133041.1-202ENST00000642053 222 ntBASIC19.23■□□□□ 0.67
USP27XA6NNY8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.23■□□□□ 0.67
USP27XA6NNY8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP27XA6NNY8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 AC006449.5-201ENST00000610658 2098 ntBASIC19.22■□□□□ 0.67
USP27XA6NNY8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 KRT17P3-201ENST00000420566 1262 ntBASIC19.22■□□□□ 0.67
USP27XA6NNY8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 KRT18P23-201ENST00000435622 1283 ntBASIC19.22■□□□□ 0.67
USP27XA6NNY8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 MIR6786-201ENST00000616843 113 ntBASIC19.22■□□□□ 0.67
USP27XA6NNY8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 AL031985.4-201ENST00000642138 673 ntBASIC19.22■□□□□ 0.67
USP27XA6NNY8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 AC046185.3-201ENST00000623228 1824 ntBASIC19.22■□□□□ 0.67
USP27XA6NNY8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP27XA6NNY8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
USP27XA6NNY8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms