Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 AC096733.2-201ENST00000609937 1394 ntBASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
TRDV1A0A1B0GX56 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.69■□□□□ 0.1
TRDV1A0A1B0GX56 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CA15P1-201ENST00000481698 905 ntBASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.68■□□□□ 0.1
TRDV1A0A1B0GX56 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.67■□□□□ 0.1
TRDV1A0A1B0GX56 MIR4674-201ENST00000582457 87 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms