Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 NKILA-202ENST00000614771 2598 ntBASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC022211.2-201ENST00000585075 2527 ntBASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC011676.5-201ENST00000624864 2660 ntBASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC007663.1-201ENST00000438948 1240 ntBASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF103-CHMP3A0A140T963 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
RNF103-CHMP3A0A140T963 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF103-CHMP3A0A140T963 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 AL023806.1-201ENST00000603994 1649 ntBASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF103-CHMP3A0A140T963 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms