Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 AC091304.2-201ENST00000564639 760 ntBASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 MIR5100-201ENST00000579544 119 ntBASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.49■□□□□ 0.39
DNMT3AQ9Y6K1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 COX5BP2-201ENST00000392354 334 ntBASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 FAM220CP-201ENST00000395253 831 ntBASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 AC122714.2-201ENST00000502787 707 ntBASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 KRT18P31-201ENST00000506277 1292 ntBASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 KRT126P-201ENST00000549467 1181 ntBASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 LINC01711-201ENST00000598340 967 ntBASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
DNMT3AQ9Y6K1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 INTS4P1-201ENST00000438455 1935 ntBASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 RCN1P2-201ENST00000398357 915 ntBASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 AC007967.3-201ENST00000434308 558 ntBASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3AQ9Y6K1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
DNMT3AQ9Y6K1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3AQ9Y6K1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3AQ9Y6K1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms