Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 TNRC18P2-201ENST00000417666 2714 ntBASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS1Q9Y6A9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 AC009237.3-201ENST00000393279 1427 ntBASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 AL031963.3-201ENST00000606441 850 ntBASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS1Q9Y6A9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 MYO15B-237ENST00000642007 4893 ntBASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 AC010525.1-201ENST00000585559 441 ntBASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS1Q9Y6A9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms