Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
USP16Q9Y5T5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USP16Q9Y5T5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 MIR1233-2-201ENST00000408138 82 ntBASIC22.65■■□□□ 1.22
USP16Q9Y5T5 MIR1233-1-201ENST00000408722 82 ntBASIC22.65■■□□□ 1.22
USP16Q9Y5T5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 AC007967.2-201ENST00000432613 625 ntBASIC22.65■■□□□ 1.22
USP16Q9Y5T5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 AL591424.1-201ENST00000442569 1213 ntBASIC22.65■■□□□ 1.22
USP16Q9Y5T5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 AC019129.2-201ENST00000609837 1235 ntBASIC22.65■■□□□ 1.22
USP16Q9Y5T5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP16Q9Y5T5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
USP16Q9Y5T5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
USP16Q9Y5T5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
USP16Q9Y5T5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.64■■□□□ 1.22
USP16Q9Y5T5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
USP16Q9Y5T5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.64■■□□□ 1.21
USP16Q9Y5T5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.64■■□□□ 1.21
USP16Q9Y5T5 TNXA-203ENST00000507684 2038 ntBASIC22.64■■□□□ 1.21
USP16Q9Y5T5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USP16Q9Y5T5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP16Q9Y5T5 BX323043.1-201ENST00000641006 1765 ntBASIC22.63■■□□□ 1.21
USP16Q9Y5T5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP16Q9Y5T5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
USP16Q9Y5T5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.63■■□□□ 1.21
USP16Q9Y5T5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.63■■□□□ 1.21
USP16Q9Y5T5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms