Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCDHGA11Q9Y5H2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PCDHGA11Q9Y5H2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCDHGA11Q9Y5H2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA11Q9Y5H2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA11Q9Y5H2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA11Q9Y5H2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA11Q9Y5H2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA11Q9Y5H2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 AC080080.1-201ENST00000625121 2420 ntBASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 AC006116.8-202ENST00000587620 1550 ntBASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 KRT18P65-201ENST00000439811 1286 ntBASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 AC006011.2-201ENST00000621313 1158 ntBASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA11Q9Y5H2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA11Q9Y5H2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA11Q9Y5H2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms