Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 FUT8-AS1-201ENST00000621019 1521 ntBASIC24.3■■□□□ 1.48
NINLQ9Y2I6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 KLF4P1-201ENST00000412782 1185 ntBASIC24.3■■□□□ 1.48
NINLQ9Y2I6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 MNT-208ENST00000575394 606 ntTSL 4 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 AC116407.3-201ENST00000623905 1129 ntBASIC24.3■■□□□ 1.48
NINLQ9Y2I6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 PC-208ENST00000529047 1607 ntTSL 3 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
NINLQ9Y2I6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 AL020989.1-201ENST00000422979 469 ntBASIC24.29■■□□□ 1.48
NINLQ9Y2I6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 BX005266.1-201ENST00000473402 457 ntBASIC24.29■■□□□ 1.48
NINLQ9Y2I6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 AC012640.2-201ENST00000561606 901 ntBASIC24.29■■□□□ 1.48
NINLQ9Y2I6 AC106730.1-201ENST00000566722 1090 ntBASIC24.29■■□□□ 1.48
NINLQ9Y2I6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NINLQ9Y2I6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 SIRPAP1-201ENST00000448467 1770 ntBASIC24.28■■□□□ 1.48
NINLQ9Y2I6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 STK25P1-201ENST00000585406 838 ntBASIC24.28■■□□□ 1.48
NINLQ9Y2I6 AC006557.2-201ENST00000592985 1240 ntBASIC24.28■■□□□ 1.48
NINLQ9Y2I6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC24.28■■□□□ 1.48
NINLQ9Y2I6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC24.27■■□□□ 1.48
NINLQ9Y2I6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms