Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 LINC01568-207ENST00000641790 1380 ntBASIC20.97■□□□□ 0.95
SMC3Q9UQE7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 PCDHA12-202ENST00000613593 2588 ntBASIC20.97■□□□□ 0.95
SMC3Q9UQE7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 LINC00304-203ENST00000565008 1864 ntBASIC20.97■□□□□ 0.95
SMC3Q9UQE7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 AC116407.2-201ENST00000613639 860 ntBASIC20.97■□□□□ 0.95
SMC3Q9UQE7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMC3Q9UQE7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 AC113404.2-201ENST00000507884 177 ntBASIC20.96■□□□□ 0.95
SMC3Q9UQE7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 AC009949.1-201ENST00000623048 1830 ntBASIC20.96■□□□□ 0.95
SMC3Q9UQE7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 AC009053.2-201ENST00000563701 2365 ntBASIC20.96■□□□□ 0.95
SMC3Q9UQE7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMC3Q9UQE7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.95■□□□□ 0.95
SMC3Q9UQE7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.95
SMC3Q9UQE7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SMC3Q9UQE7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 AC141257.4-201ENST00000634557 245 ntBASIC20.95■□□□□ 0.94
SMC3Q9UQE7 AC136944.6-201ENST00000634818 245 ntBASIC20.95■□□□□ 0.94
SMC3Q9UQE7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMC3Q9UQE7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms