Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 NCF1C-201ENST00000438382 1427 ntBASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 SLC25A6P5-201ENST00000435663 894 ntBASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 AC004706.3-202ENST00000621574 984 ntBASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 AC009336.1-201ENST00000608941 1553 ntBASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPO2Q9UMS6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
SYNPO2Q9UMS6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SYNPO2Q9UMS6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AC092910.1-201ENST00000482027 1129 ntBASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 Z83851.2-201ENST00000609564 659 ntBASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 AC148477.5-201ENST00000625164 1645 ntBASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.45■□□□□ 0.86
SYNPO2Q9UMS6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 STK19B-204ENST00000512515 211 ntBASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 AL356488.2-201ENST00000602755 427 ntBASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 MIR1199-201ENST00000621445 119 ntBASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SYNPO2Q9UMS6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 AL591424.1-201ENST00000442569 1213 ntBASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 AC136632.2-201ENST00000512891 861 ntBASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 AC034105.1-201ENST00000563488 319 ntBASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 AC023511.2-201ENST00000618803 211 ntBASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPO2Q9UMS6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms