Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 AC106820.2-201ENST00000563775 3264 ntBASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.28■□□□□ 0.36
CPNE7Q9UBL6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 FGFR3P6-201ENST00000457012 610 ntBASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE7Q9UBL6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CPNE7Q9UBL6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 SCARNA2-201ENST00000458748 420 ntBASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 AF186996.4-201ENST00000467186 377 ntBASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 AC122714.2-201ENST00000502787 707 ntBASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE7Q9UBL6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms