Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AC063926.2-201ENST00000623766 1308 ntBASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AC005034.1-201ENST00000426657 489 ntBASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AC069262.1-201ENST00000539058 672 ntBASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AC093520.2-201ENST00000561830 333 ntBASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AC022145.2-201ENST00000598203 171 ntBASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AC023141.13-201ENST00000604991 943 ntBASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 LINC00628-201ENST00000628516 1289 ntBASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXXC1Q9P0U4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 AF228730.6-201ENST00000641497 218 ntBASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 AC084121.3-201ENST00000641716 218 ntBASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 AC105233.6-201ENST00000642093 218 ntBASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXXC1Q9P0U4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CXXC1Q9P0U4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.02■□□□□ 0.63
CXXC1Q9P0U4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CXXC1Q9P0U4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 AC023141.5-201ENST00000458585 616 ntBASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 AC007064.4-201ENST00000637740 555 ntBASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CXXC1Q9P0U4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 AC003669.1-201ENST00000334569 611 ntBASIC19■□□□□ 0.63
CXXC1Q9P0U4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 AIRN-201ENST00000601203 4374 ntBASIC19■□□□□ 0.63
CXXC1Q9P0U4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19■□□□□ 0.63
CXXC1Q9P0U4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19■□□□□ 0.63
CXXC1Q9P0U4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms