Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 AC084018.2-201ENST00000613093 2607 ntBASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 GCSHP5-201ENST00000443090 522 ntBASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 TSPY20P-201ENST00000450910 630 ntBASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 SEC1P-202ENST00000473944 940 ntBASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 C2orf69P3-201ENST00000565542 1120 ntBASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE2Q9NRR3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 LINC00167-201ENST00000530583 1419 ntBASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 AC098590.1-201ENST00000468126 897 ntBASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC42SE2Q9NRR3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 NKILA-202ENST00000614771 2598 ntBASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC42SE2Q9NRR3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms