Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PCDHA12-202ENST00000613593 2588 ntBASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 AP003733.1-201ENST00000491725 852 ntBASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN3Q9NQS3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 AC012317.2-201ENST00000623305 2251 ntBASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NECTIN3Q9NQS3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 SLC25A6P5-201ENST00000435663 894 ntBASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 AC011498.5-201ENST00000592027 486 ntBASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NECTIN3Q9NQS3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms