Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 AC138028.4-201ENST00000564984 1845 ntBASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 SLC25A6P5-201ENST00000435663 894 ntBASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 FAM207BP-201ENST00000447172 505 ntBASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C12orf4Q9NQ89 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 AP000593.1-201ENST00000393668 712 ntBASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 AC073648.6-201ENST00000641589 218 ntBASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
C12orf4Q9NQ89 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 AC008741.2-201ENST00000612792 3115 ntBASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
C12orf4Q9NQ89 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms