Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.87■□□□□ 0.77
VTA1Q9NP79 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VTA1Q9NP79 DDX43P3-201ENST00000441064 443 ntBASIC19.87■□□□□ 0.77
VTA1Q9NP79 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.87■□□□□ 0.77
VTA1Q9NP79 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.87■□□□□ 0.77
VTA1Q9NP79 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VTA1Q9NP79 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
VTA1Q9NP79 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTA1Q9NP79 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
VTA1Q9NP79 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTA1Q9NP79 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTA1Q9NP79 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTA1Q9NP79 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
VTA1Q9NP79 BX276092.7-203ENST00000637198 1536 ntBASIC19.86■□□□□ 0.77
VTA1Q9NP79 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 AC018445.3-201ENST00000624177 1945 ntBASIC19.86■□□□□ 0.77
VTA1Q9NP79 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 AC112482.1-201ENST00000492080 688 ntBASIC19.86■□□□□ 0.77
VTA1Q9NP79 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 AC006504.4-201ENST00000592118 1568 ntBASIC19.86■□□□□ 0.77
VTA1Q9NP79 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTA1Q9NP79 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.86■□□□□ 0.77
VTA1Q9NP79 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.85■□□□□ 0.77
VTA1Q9NP79 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 AC109462.3-201ENST00000573934 613 ntBASIC19.85■□□□□ 0.77
VTA1Q9NP79 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTA1Q9NP79 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VTA1Q9NP79 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.84■□□□□ 0.77
VTA1Q9NP79 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.84■□□□□ 0.77
VTA1Q9NP79 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTA1Q9NP79 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
VTA1Q9NP79 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.84■□□□□ 0.77
VTA1Q9NP79 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VTA1Q9NP79 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
VTA1Q9NP79 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTA1Q9NP79 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTA1Q9NP79 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTA1Q9NP79 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.84■□□□□ 0.77
VTA1Q9NP79 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTA1Q9NP79 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTA1Q9NP79 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VTA1Q9NP79 AC023274.1-201ENST00000418278 595 ntBASIC19.84■□□□□ 0.77
VTA1Q9NP79 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms