Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 AC005082.1-201ENST00000413042 2259 ntBASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFYVE28Q9HCC9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 PTCHD3P3-201ENST00000403073 906 ntBASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 AC005498.2-205ENST00000593218 784 ntBASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 AC092902.6-201ENST00000641783 218 ntBASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFYVE28Q9HCC9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ZFYVE28Q9HCC9 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.27■□□□□ 0.83
ZFYVE28Q9HCC9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ZFYVE28Q9HCC9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZFYVE28Q9HCC9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
ZFYVE28Q9HCC9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZFYVE28Q9HCC9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 AP002414.1-201ENST00000391405 1147 ntBASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 AC190387.1-201ENST00000551683 408 ntBASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZFYVE28Q9HCC9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 FAM86GP-201ENST00000448322 971 ntBASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 OR7E47P-204ENST00000575924 449 ntBASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms