Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS11Q9H270 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS11Q9H270 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS11Q9H270 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS11Q9H270 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
VPS11Q9H270 MIR1238-201ENST00000408483 83 ntBASIC17.97■□□□□ 0.47
VPS11Q9H270 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.97■□□□□ 0.47
VPS11Q9H270 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS11Q9H270 FITM1-202ENST00000559294 800 ntBASIC17.97■□□□□ 0.47
VPS11Q9H270 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS11Q9H270 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS11Q9H270 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS11Q9H270 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS11Q9H270 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS11Q9H270 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS11Q9H270 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VPS11Q9H270 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.97■□□□□ 0.47
VPS11Q9H270 AL118508.1-201ENST00000613502 2345 ntBASIC17.97■□□□□ 0.47
VPS11Q9H270 CROCCP2-202ENST00000412962 2773 ntBASIC17.96■□□□□ 0.47
VPS11Q9H270 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VPS11Q9H270 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VPS11Q9H270 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.96■□□□□ 0.47
VPS11Q9H270 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 DUTP2-201ENST00000519164 463 ntBASIC17.96■□□□□ 0.47
VPS11Q9H270 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.96■□□□□ 0.47
VPS11Q9H270 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.96■□□□□ 0.47
VPS11Q9H270 MIR4785-201ENST00000585005 73 ntBASIC17.96■□□□□ 0.47
VPS11Q9H270 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS11Q9H270 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS11Q9H270 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VPS11Q9H270 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS11Q9H270 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS11Q9H270 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VPS11Q9H270 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS11Q9H270 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VPS11Q9H270 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS11Q9H270 CROCCP1-201ENST00000426910 5675 ntBASIC17.96■□□□□ 0.46
VPS11Q9H270 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.96■□□□□ 0.46
VPS11Q9H270 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VPS11Q9H270 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 AC100803.2-201ENST00000562459 1963 ntBASIC17.95■□□□□ 0.46
VPS11Q9H270 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS11Q9H270 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS11Q9H270 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VPS11Q9H270 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS11Q9H270 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS11Q9H270 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS11Q9H270 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS11Q9H270 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
VPS11Q9H270 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.95■□□□□ 0.46
VPS11Q9H270 C2orf69P3-201ENST00000565542 1120 ntBASIC17.95■□□□□ 0.46
VPS11Q9H270 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS11Q9H270 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.95■□□□□ 0.46
VPS11Q9H270 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS11Q9H270 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VPS11Q9H270 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VPS11Q9H270 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS11Q9H270 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS11Q9H270 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VPS11Q9H270 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VPS11Q9H270 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VPS11Q9H270 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 AC132938.6-201ENST00000623828 1655 ntBASIC17.94■□□□□ 0.46
VPS11Q9H270 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms