Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 AC132938.6-201ENST00000623828 1655 ntBASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 MMP23A-201ENST00000234610 1017 ntBASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 FAM87A-204ENST00000613235 858 ntBASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 AL355312.1-201ENST00000407115 2176 ntBASIC16.52■□□□□ 0.24
POLR2J3Q9H1A7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR2J3Q9H1A7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 AD000864.1-201ENST00000624076 2295 ntBASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 CYP2D8P-201ENST00000433633 1490 ntBASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR2J3Q9H1A7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 KRT89P-201ENST00000620027 1478 ntBASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 INGX-201ENST00000359239 846 ntBASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms